[Bug 1186064] Re: python-tables package not usable

registration_for_reporting_bugs_r_u_serious f1440672 at rmqkr.net
Fri May 31 00:44:57 UTC 2013


the bug actually affects the python-tables package but ubuntu-bug said
python2.7 as i used python2.7 to run the process producing this bug

** Package changed: python2.7 (Ubuntu) => pytables (Ubuntu)

-- 
You received this bug notification because you are a member of Ubuntu
Foundations Bugs, which is subscribed to python2.7 in Ubuntu.
https://bugs.launchpad.net/bugs/1186064

Title:
  python-tables package not usable

Status in “pytables” package in Ubuntu:
  New

Bug description:
  Ubuntu Version:
    raring
    Description:       Ubuntu 13.04
    Release:              13.04

  package-version:
    python-tables:
      Installiert:           2.4.0-1ubuntu1
      Installationskandidat: 2.4.0-1ubuntu1
      Versionstabelle:
     *** 2.4.0-1ubuntu1 0
            500 http://archive.ubuntu.com/ubuntu/ raring/universe amd64 Packages
            100 /var/lib/dpkg/status

  Expected behaviour:
    No Exceptions on import of the provided python module (tables).

  Instead a ValueError occurs:
    ValueError: numpy.dtype has the wrong size, try recompiling

  Long description:

  after installing the python-tables package it is not possible to
  import the tables module (that is provided by the package).

  to reproduce just try to run the following code after installing the python-tables package:
    python -c 'import tables'

  here the Exception/Output:
  ----
  Traceback (most recent call last):
    File "<string>", line 1, in <module>
    File "/usr/lib/python2.7/dist-packages/tables/__init__.py", line 30, in <module>
      from tables.utilsExtension import getPyTablesVersion, getHDF5Version
    File "numpy.pxd", line 155, in init tables.utilsExtension (tables/utilsExtension.c:14478)
  ValueError: numpy.dtype has the wrong size, try recompiling
  ----

  So the problem seems to be related to a wrong numpy version when
  compiling python-tables.

  A possible hint/workaround: installation of python-tables using pip works fine:
    pip install tables
  (you may need a sudo if you're not on a virtualenv)

  ProblemType: Bug
  DistroRelease: Ubuntu 13.04
  Package: python2.7-minimal 2.7.4-2ubuntu3
  ProcVersionSignature: Ubuntu 3.8.0-22.33-generic 3.8.11
  Uname: Linux 3.8.0-22-generic x86_64
  ApportVersion: 2.9.2-0ubuntu8
  Architecture: amd64
  Date: Fri May 31 02:26:20 2013
  ExecutablePath: /usr/bin/python2.7
  InstallationDate: Installed on 2011-10-31 (577 days ago)
  InstallationMedia: Lubuntu 11.10 "Oneiric Ocelot" - Release amd64 (20111012)
  LocalLibraries: /usr/local/lib/python2.7/dist-packages/numpy/lib/_compiled_base.so /usr/local/lib/python2.7/dist-packages/numpy/linalg/lapack_lite.so /usr/local/lib/python2.7/dist-packages/numpy/core/_sort.so /usr/local/lib/python2.7/dist-packages/numpy/fft/fftpack_lite.so /usr/local/lib/python2.7/dist-packages/numpy/core/scalarmath.so /usr/local/lib/python2.7/dist-packages/numpy/core/multiarray.so /usr/local/lib/python2.7/dist-packages/numpy/random/mtrand.so /usr/local/lib/python2.7/dist-packages/numpy/core/umath.so
  MarkForUpload: True
  SourcePackage: python2.7
  UpgradeStatus: Upgraded to raring on 2013-05-23 (7 days ago)

To manage notifications about this bug go to:
https://bugs.launchpad.net/ubuntu/+source/pytables/+bug/1186064/+subscriptions




More information about the foundations-bugs mailing list