[Bug 500453] [NEW] crashes upon launch; ClippingPlane index out of range

[Daniel Asarnow]

Public bug reported:

Binary package hint: mgltools-pmv

runPmv returns the following error.  The loading progress window appears
and goes to 100%, however the error occurs early.  Pressing enter
removes the window and returns to command prompt.

$ runPmv 
Run PMV from  /usr/lib/python2.5/site-packages/Pmv
Resource file used to customize PMV: /home/da/.mgltools/1.5.4/Pmv/_pmvrc

Warning (from warnings module):
  File "/usr/lib/python2.5/site-packages/DejaVu/Clip.py", line 98
    self.Ri = glCleanRotMat(self.Ri)
DeprecationWarning: PyArray_FromDims: use PyArray_SimpleNew.
>>> 
Warning (from warnings module):
  File "/usr/lib/python2.5/site-packages/DejaVu/Clip.py", line 98
    self.Ri = glCleanRotMat(self.Ri)
DeprecationWarning: PyArray_FromDimsAndDataAndDescr: use PyArray_NewFromDescr.
>>> Traceback (most recent call last):
  File "/usr/lib/python2.5/site-packages/Pmv/__init__.py", line 371, in runPmv
    title=title, withShell= not interactive, verbose=False, gui=gui)
  File "/usr/lib/python2.5/site-packages/Pmv/moleculeViewer.py", line 315, in __init__
    verbose=verbose, trapExceptions=trapExceptions)
  File "/usr/lib/python2.5/site-packages/ViewerFramework/VF.py", line 345, in __init__
    verbose=verbose)
  File "/usr/lib/python2.5/site-packages/ViewerFramework/VFGUI.py", line 270, in __init__
    cnf = {"addScenarioButton": False})
  File "/usr/lib/python2.5/site-packages/DejaVu/Viewer.py", line 675, in __init__
    cp = ClippingPlane(self.rootObject, i, self)
  File "/usr/lib/python2.5/site-packages/DejaVu/Clip.py", line 42, in __init__
    self.id = self.clipPlaneNames[num]
IndexError: list index out of range

Please include this Traceback in your bug report.

hit enter to continue

** Affects: mgltools-dejavu (Ubuntu)
     Importance: Undecided
         Status: New

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crashes upon launch; ClippingPlane index out of range
https://bugs.launchpad.net/bugs/500453
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