funny disk trouble after kernel upgrade to 2.6.31-15-generic. Got ideas?

Paul Johnson pauljohn32 at gmail.com
Sat Nov 28 22:08:00 UTC 2009


I have Ubuntu 9.10 on a Lenovo T61. Since the new kernel was
installed, I've had some bizarre hard disk trouble.

It started after a 'suspend to ram'.  I restarted the system and the
hard disk was mounted read only.  There was beeping from the
motherboard. Not good. The system did run, programs were open, but it
could not write anything.

Upon a restart, I see some warnings flash on the screen. They go by
very fast, they say something like /dev/UUID-1324324132114 not yet
available.  The first time this happened, those warnings stayed on the
screen longer.

It seems to me that whenever I let the newer kernel boot, I get that
same kind of warning, it goes by fast.  If I select the previous
kernel, I don't see the same trouble. I don't hear the motherboard
beeps anymore, thank goodness.

I don't think the hard disk is failing, if I read this correctly

==============================================
sudo /usr/sbin/smartctl -a /dev/sda
smartctl version 5.38 [i686-pc-linux-gnu] Copyright (C) 2002-8 Bruce Allen
Home page is http://smartmontools.sourceforge.net/

=== START OF INFORMATION SECTION ===
Device Model:     ST9320421ASG
Serial Number:    5TJ00HZE
Firmware Version: SD13
User Capacity:    320,072,933,376 bytes
Device is:        Not in smartctl database [for details use: -P showall]
ATA Version is:   8
ATA Standard is:  ATA-8-ACS revision 4
Local Time is:    Sat Nov 28 15:47:10 2009 CST
SMART support is: Available - device has SMART capability.
SMART support is: Enabled

=== START OF READ SMART DATA SECTION ===
SMART overall-health self-assessment test result: PASSED

General SMART Values:
Offline data collection status:  (0x00) Offline data collection activity
                                        was never started.
                                        Auto Offline Data Collection: Disabled.
Self-test execution status:      (   0) The previous self-test routine completed
                                        without error or no self-test has ever
                                        been run.
Total time to complete Offline
data collection:                 (   0) seconds.
Offline data collection
capabilities:                    (0x73) SMART execute Offline immediate.
                                        Auto Offline data collection
on/off support.
                                        Suspend Offline collection upon new
                                        command.
                                        No Offline surface scan supported.
                                        Self-test supported.
                                        Conveyance Self-test supported.
                                        Selective Self-test supported.
SMART capabilities:            (0x0003) Saves SMART data before entering
                                        power-saving mode.
                                        Supports SMART auto save timer.
Error logging capability:        (0x01) Error logging supported.
                                        General Purpose Logging supported.
Short self-test routine
recommended polling time:        (   1) minutes.
Extended self-test routine
recommended polling time:        (  96) minutes.
Conveyance self-test routine
recommended polling time:        (   2) minutes.
SCT capabilities:              (0x103b) SCT Status supported.
                                        SCT Feature Control supported.
                                        SCT Data Table supported.

SMART Attributes Data Structure revision number: 10
Vendor Specific SMART Attributes with Thresholds:
ID# ATTRIBUTE_NAME          FLAG     VALUE WORST THRESH TYPE
UPDATED  WHEN_FAILED RAW_VALUE
  1 Raw_Read_Error_Rate     0x000f   118   099   006    Pre-fail
Always       -       182777373
  3 Spin_Up_Time            0x0003   099   097   000    Pre-fail
Always       -       0
  4 Start_Stop_Count        0x0032   093   093   020    Old_age
Always       -       7813
  5 Reallocated_Sector_Ct   0x0033   100   100   036    Pre-fail
Always       -       0
  7 Seek_Error_Rate         0x000f   054   046   030    Pre-fail
Always       -       657168897142
  9 Power_On_Hours          0x0032   097   097   000    Old_age
Always       -       2810
 10 Spin_Retry_Count        0x0013   100   100   097    Pre-fail
Always       -       9
 12 Power_Cycle_Count       0x0032   099   037   020    Old_age
Always       -       1084
184 Unknown_Attribute       0x0032   100   100   099    Old_age
Always       -       0
187 Reported_Uncorrect      0x0032   100   100   000    Old_age
Always       -       0
188 Unknown_Attribute       0x0032   100   094   000    Old_age
Always       -       1603
189 High_Fly_Writes         0x003a   100   100   000    Old_age
Always       -       0
190 Airflow_Temperature_Cel 0x0022   070   054   045    Old_age
Always       -       30 (Lifetime Min/Max 24/30)
191 G-Sense_Error_Rate      0x0032   100   100   000    Old_age
Always       -       0
192 Power-Off_Retract_Count 0x0032   100   100   000    Old_age
Always       -       1187
193 Load_Cycle_Count        0x0032   060   060   000    Old_age
Always       -       81417
194 Temperature_Celsius     0x0022   030   046   000    Old_age
Always       -       30 (0 14 0 0)
195 Hardware_ECC_Recovered  0x001a   055   040   000    Old_age
Always       -       182777373
197 Current_Pending_Sector  0x0012   100   100   000    Old_age
Always       -       0
198 Offline_Uncorrectable   0x0010   100   100   000    Old_age
Offline      -       0
199 UDMA_CRC_Error_Count    0x003e   200   200   000    Old_age
Always       -       0
254 Unknown_Attribute       0x0032   001   001   000    Old_age
Always       -       250

SMART Error Log Version: 1
No Errors Logged

SMART Self-test log structure revision number 1
Num  Test_Description    Status                  Remaining
LifeTime(hours)  LBA_of_first_error
# 1  Extended offline    Completed without error       00%       723         -

SMART Selective self-test log data structure revision number 1
 SPAN  MIN_LBA  MAX_LBA  CURRENT_TEST_STATUS
    1        0        0  Not_testing
    2        0        0  Not_testing
    3        0        0  Not_testing
    4        0        0  Not_testing
    5        0        0  Not_testing
Selective self-test flags (0x0):
  After scanning selected spans, do NOT read-scan remainder of disk.
If Selective self-test is pending on power-up, resume after 0 minute delay.
=============================================================

I've been reading /var/log/messages over and over, don't know eactly
what to look for.  In case you know what to look for, let me know
(please).  My best guess is that the trouble happens around this part:

Nov 23 19:02:53 pols124 kernel: [    9.127007]  (2474000 KHz - 2494000
KHz @ 20000 KHz), (300 mBi, 2000 mBm)
Nov 23 19:02:53 pols124 kernel: [    9.127009]  (5170000 KHz - 5250000
KHz @ 40000 KHz), (300 mBi, 2000 mBm)
Nov 23 19:02:53 pols124 kernel: [    9.127010]  (5735000 KHz - 5835000
KHz @ 40000 KHz), (300 mBi, 2000 mBm)
Nov 23 19:02:53 pols124 kernel: [    9.259230] EXT4-fs (sda5):
internal journal on sda5:8
Nov 23 19:02:53 pols124 kernel: [    9.603872] input: HDA Digital
PCBeep as /devices/pci0000:00/0000:00:1b.0/input/input8
Nov 23 19:02:53 pols124 kernel: [   11.180071] CE: hpet increasing
min_delta_ns to 15000 nsec
Nov 23 19:02:53 pols124 kernel: [   11.316293] kjournald starting.
Commit interval 5 seconds
Nov 23 19:02:53 pols124 kernel: [   11.316699] EXT3 FS on sda3, internal journal
Nov 23 19:02:53 pols124 kernel: [   11.316703] EXT3-fs: mounted
filesystem with writeback data mode.
Nov 23 19:02:53 pols124 kernel: [   11.957099] EXT4-fs (sda7): barriers enabled
Nov 23 19:02:53 pols124 kernel: [   11.957515] kjournald2 starting:
pid 1021, dev sda7:8, commit interval 5 seconds
Nov 23 19:02:53 pols124 kernel: [   11.957948] EXT4-fs (sda7):
internal journal on sda7:8




-- 
Paul E. Johnson
Professor, Political Science
1541 Lilac Lane, Room 504
University of Kansas




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