[Bug 1882998] Re: openvdb6.2 is non functionnal on Focal due to jemalloc

[Sebastian Jaenicke]

Please note this also affects gridengine-drmaa1.0, where libdrmaa.so is linked vs libjemalloc.so.2,
and attempts to dlopen() libdrmaa fail with 'cannot allocate memory in static TLS block'. 

According to https://github.com/jemalloc/jemalloc/issues/1237, this can be fixed by configuring
jemalloc with '--disable-initial-exec-tls'.

** Bug watch added: github.com/jemalloc/jemalloc/issues #1237
   https://github.com/jemalloc/jemalloc/issues/1237

-- 
You received this bug notification because you are a member of Ubuntu
Sponsors Team, which is subscribed to the bug report.
https://bugs.launchpad.net/bugs/1882998

Title:
   openvdb6.2 is non functionnal on Focal due to jemalloc

Status in jemalloc package in Ubuntu:
  Confirmed
Status in openvdb package in Ubuntu:
  Fix Released
Status in jemalloc source package in Focal:
  New
Status in openvdb source package in Focal:
  New
Status in jemalloc package in Debian:
  New

Bug description:
  See here : https://github.com/AcademySoftwareFoundation/openvdb/issues/732
  It seems the issue is due to jemalloc.
  Using openvdb7.0 the problem dispears, probably thanks to the following:

  * d/control: Remove dependency to jemalloc. See #951704 for details

  Would it be possible to remove the dependency to jemalloc on the focal
  version (6.2) or backport version 7.0 from groovy to focal ?

  ProblemType: Bug
  DistroRelease: Ubuntu 20.04
  Package: libopenvdb-dev 6.2.1-8ubuntu1
  ProcVersionSignature: Ubuntu 5.4.0-33.37-generic 5.4.34
  Uname: Linux 5.4.0-33-generic x86_64
  ApportVersion: 2.20.11-0ubuntu27.2
  Architecture: amd64
  CasperMD5CheckResult: skip
  CurrentDesktop: ubuntu:GNOME
  Date: Wed Jun 10 19:49:55 2020
  InstallationDate: Installed on 2020-05-15 (26 days ago)
  InstallationMedia: Ubuntu 20.04 LTS "Focal Fossa" - Release amd64 (20200423)
  SourcePackage: openvdb
  UpgradeStatus: No upgrade log present (probably fresh install)

To manage notifications about this bug go to:
https://bugs.launchpad.net/ubuntu/+source/jemalloc/+bug/1882998/+subscriptions