[Bug 1828159] Re: Sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

Graham Inggs graham.inggs+ubuntu at gmail.com
Wed May 8 12:17:29 UTC 2019


This bug was fixed in the package hmmer - 3.2.1+dfsg-1
Sponsored for Dylan Aïssi (daissi)

---------------
hmmer (3.2.1+dfsg-1) unstable; urgency=medium

  [ Andreas Tille ]
  * Fix watch file
  * New upstream version
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.0
  * Adapt doc-base control file to new location of doc
  * d/rules:
     - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
     - Do not parse d/changelog
     - Fix permission of manpage

  [ Dylan Aïssi ]
  * Fix OMICtools ID and replace RRID by SciCrunch

 -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200

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https://bugs.launchpad.net/bugs/1828159

Title:
  Sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

Status in hmmer package in Ubuntu:
  Fix Released

Bug description:
  Please sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

  Explanation of the Ubuntu delta and why it can be dropped:
    * Sync on Debian unstable.  Remaining changes:
      - Enable altivec on powerpc/ppc64el
      - Enable arch:any builds

  You can drop the delta because ppc64el is not supported by the hmmer3
  devs (see [1] p.19).

  I have re-enabled builds for powerpc [2] and ppc64 [3] (both are
  supported by upstream [1]). It will be uploaded in Debian after the
  current freeze, but I think it is not useful to keep a delta here only
  for not official arches (powerpc and ppc64).

  [1] http://eddylab.org/software/hmmer/Userguide.pdf
  [2] https://salsa.debian.org/med-team/hmmer/commit/cc7071c346d9b756a97aef1f76bcf43260fca7a2
  [3] https://salsa.debian.org/med-team/hmmer/commit/42f2718a6e99d097264d46a335dd8fe964016955

  
  Changelog entries since current eoan version 3.1b2+dfsg-5ubuntu1:

  hmmer (3.2.1+dfsg-1) unstable; urgency=medium

    [ Andreas Tille ]
    * Fix watch file
    * New upstream version
    * debhelper 11
    * Point Vcs fields to salsa.debian.org
    * Standards-Version: 4.2.0
    * Adapt doc-base control file to new location of doc
    * d/rules:
       - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
       - Do not parse d/changelog
       - Fix permission of manpage

    [ Dylan Aïssi ]
    * Fix OMICtools ID and replace RRID by SciCrunch

   -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200

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