[Bug 1828159] [NEW] Sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

[Dylan Aïssi]

Public bug reported:

Please sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

Explanation of the Ubuntu delta and why it can be dropped:
  * Sync on Debian unstable.  Remaining changes:
    - Enable altivec on powerpc/ppc64el
    - Enable arch:any builds

You can drop the delta because ppc64el is not supported by the hmmer3
devs (see [1] p.19).

I have re-enabled builds for powerpc [2] and ppc64 [3] (both are
supported by upstream [1]). It will be uploaded in Debian after the
current freeze, but I think it is not useful to keep a delta here only
for not official arches (powerpc and ppc64).

[1] http://eddylab.org/software/hmmer/Userguide.pdf
[2] https://salsa.debian.org/med-team/hmmer/commit/cc7071c346d9b756a97aef1f76bcf43260fca7a2
[3] https://salsa.debian.org/med-team/hmmer/commit/42f2718a6e99d097264d46a335dd8fe964016955


Changelog entries since current eoan version 3.1b2+dfsg-5ubuntu1:

hmmer (3.2.1+dfsg-1) unstable; urgency=medium

  [ Andreas Tille ]
  * Fix watch file
  * New upstream version
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.0
  * Adapt doc-base control file to new location of doc
  * d/rules:
     - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
     - Do not parse d/changelog
     - Fix permission of manpage

  [ Dylan Aïssi ]
  * Fix OMICtools ID and replace RRID by SciCrunch

 -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200

** Affects: hmmer (Ubuntu)
     Importance: Wishlist
         Status: New

** Changed in: hmmer (Ubuntu)
   Importance: Undecided => Wishlist

** Description changed:

  Please sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)
  
  Explanation of the Ubuntu delta and why it can be dropped:
-   * Sync on Debian unstable.  Remaining changes:
-     - Enable altivec on powerpc/ppc64el
-     - Enable arch:any builds
+   * Sync on Debian unstable.  Remaining changes:
+     - Enable altivec on powerpc/ppc64el
+     - Enable arch:any builds
  
+ You can drop the delta because ppc64el is not supported by the hmmer3
+ devs (see [1] p.19).
+ 
+ I have re-enabled builds for powerpc [2] and ppc64 [3] (both are
+ supported by upstream [1]). It will be uploaded in Debian after the
+ current freeze, but I think it is not useful to keep a delta here only
+ for not official arches (powerpc and ppc64).
+ 
+ [1] http://eddylab.org/software/hmmer/Userguide.pdf
+ [2] https://salsa.debian.org/med-team/hmmer/commit/cc7071c346d9b756a97aef1f76bcf43260fca7a2
+ [3] https://salsa.debian.org/med-team/hmmer/commit/42f2718a6e99d097264d46a335dd8fe964016955
  
  
  Changelog entries since current eoan version 3.1b2+dfsg-5ubuntu1:
  
  hmmer (3.2.1+dfsg-1) unstable; urgency=medium
  
-   [ Andreas Tille ]
-   * Fix watch file
-   * New upstream version
-   * debhelper 11
-   * Point Vcs fields to salsa.debian.org
-   * Standards-Version: 4.2.0
-   * Adapt doc-base control file to new location of doc
-   * d/rules:
-      - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
-      - Do not parse d/changelog
-      - Fix permission of manpage
+   [ Andreas Tille ]
+   * Fix watch file
+   * New upstream version
+   * debhelper 11
+   * Point Vcs fields to salsa.debian.org
+   * Standards-Version: 4.2.0
+   * Adapt doc-base control file to new location of doc
+   * d/rules:
+      - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
+      - Do not parse d/changelog
+      - Fix permission of manpage
  
-   [ Dylan Aïssi ]
-   * Fix OMICtools ID and replace RRID by SciCrunch
+   [ Dylan Aïssi ]
+   * Fix OMICtools ID and replace RRID by SciCrunch
  
-  -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200
+  -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200

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https://bugs.launchpad.net/bugs/1828159

Title:
  Sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

Status in hmmer package in Ubuntu:
  New

Bug description:
  Please sync hmmer 3.2.1+dfsg-1 (universe) from Debian unstable (main)

  Explanation of the Ubuntu delta and why it can be dropped:
    * Sync on Debian unstable.  Remaining changes:
      - Enable altivec on powerpc/ppc64el
      - Enable arch:any builds

  You can drop the delta because ppc64el is not supported by the hmmer3
  devs (see [1] p.19).

  I have re-enabled builds for powerpc [2] and ppc64 [3] (both are
  supported by upstream [1]). It will be uploaded in Debian after the
  current freeze, but I think it is not useful to keep a delta here only
  for not official arches (powerpc and ppc64).

  [1] http://eddylab.org/software/hmmer/Userguide.pdf
  [2] https://salsa.debian.org/med-team/hmmer/commit/cc7071c346d9b756a97aef1f76bcf43260fca7a2
  [3] https://salsa.debian.org/med-team/hmmer/commit/42f2718a6e99d097264d46a335dd8fe964016955

  
  Changelog entries since current eoan version 3.1b2+dfsg-5ubuntu1:

  hmmer (3.2.1+dfsg-1) unstable; urgency=medium

    [ Andreas Tille ]
    * Fix watch file
    * New upstream version
    * debhelper 11
    * Point Vcs fields to salsa.debian.org
    * Standards-Version: 4.2.0
    * Adapt doc-base control file to new location of doc
    * d/rules:
       - Respect DEB_BUILD_OPTIONS in override_dh_auto_test
       - Do not parse d/changelog
       - Fix permission of manpage

    [ Dylan Aïssi ]
    * Fix OMICtools ID and replace RRID by SciCrunch

   -- Andreas Tille <tille at debian.org>  Fri, 24 Aug 2018 08:48:36 +0200

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