[ubuntu/maverick] fsl 4.1.6-1 (Accepted)

Artur Rona angelabad at gmail.com
Thu Jul 8 00:00:27 BST 2010


fsl (4.1.6-1) unstable; urgency=low

  * New upstream release. Merged various patches with upstream.
    Closes: #581095.

fsl (4.1.5.2-3) unstable; urgency=low

  * Switch to source package format 3.0 (quilt). Convert all Git
    feature/bugfix branches into quilt patch series.
  * Remove obsolete dh_desktop call from debian/rules.
  * Add debhelper dependency variables to fsl-doc control stanza.
  * No longer compile with '-Wl,--as-needed' to prevent symbols from
    libcprob to be substituted by external replacements.
  * Updated and extended the package description.
  * Changed maintainer to NeuroDebian. Moved myself into uploaders and
    added Yaroslav Halchenko.
  * Fix syntax error in 'rotate_bvecs' script.

fsl (4.1.5.2-2) unstable; urgency=low

  * Fix broken fslmaths option (-tfce). Thanks to Clark Johnson and Matthew
    Webster.
  * Bumped Standard version to 3.8.4.0 -- no changes necessary.
  * Remove support for octave2.1 dependency and allow for octave3.2.
    Thanks to Thomas Weber for the report (Closes: #572763).

fsl (4.1.5.2-1) unstable; urgency=low

  * New upstream service release. Fixes issues with broken FNIRT scripts.
  * Include `fslecho` script in the binary package (Closes: #567133). Thanks to
    Petr Hlustík for reporting.

fsl (4.1.5-1) unstable; urgency=low

  * New upstream release.
    * An issue with Randomise "pausing" has been fixed.
    * There are some improvements to the bedpostx monitor script.
    * Large speedup for invwarp by automatically adjusting the useful FOV
      internally (no cropping of the original images needed).
    * Non-linear initialisation in bedpostx to allow better convergence of
      the MCMC chains
    * Some improvements and new options in Probtrackx:
      - allows to input nonlinear (FNIRT) warpfield instead of FLIRT
        matrices
      - bug fix in initial fibre selection
      - tracking from freesurfer cortical surface (into the brain)
      - tracking from random locations within a seed voxel
  * No longer compile with '-ansi -pedantic', since a significant part of the
    sources is actually not ANSI compliant (Closes: #546003).
  * Don't use roundl() to round doubles in src/basisfield/splinefield.cpp to
    prevent FTFBS on ARMEL (Closes: #513272).
  * Bumped Standard version to 3.8.3.0 -- no changes necessary.
  * New config variable FSLPARALLEL. If set, FSL will submit jobs to a running
    Sun Gridengine. By default, this setting is disabled in /etc/fsl/fsl.sh.
    (Closes: #546238). Added suggested package 'gridengine-client'.
    See README.Debian for more information.
  * Remove all menu items of GUI-apps that are directly accessible from the
    central FSL GUI. The menu got too crowded with all the different FSL
    items.

Date: Mon, 05 Jul 2010 10:44:16 -0400
Changed-By: Artur Rona <angelabad at gmail.com>
Maintainer: NeuroDebian Team <team at neuro.debian.net>
Signed-By: Stefano Rivera <launchpad at rivera.za.net>
Origin: debian/unstable
https://launchpad.net/ubuntu/maverick/+source/fsl/4.1.6-1
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Hash: SHA1

Format: 1.8
Date: Mon, 05 Jul 2010 10:44:16 -0400
Source: fsl
Binary: fsl fsl-doc
Architecture: source
Version: 4.1.6-1
Distribution: maverick
Urgency: low
Maintainer: NeuroDebian Team <team at neuro.debian.net>
Changed-By: Artur Rona <angelabad at gmail.com>
Description: 
 fsl        - analysis tools for FMRI, MRI and DTI brain imaging
 fsl-doc    - documentation for FSL
Closes: 513272 546003 546238 567133 572763 581095
Changes: 
 fsl (4.1.6-1) unstable; urgency=low
 .
   * New upstream release. Merged various patches with upstream.
     Closes: #581095.
 .
 fsl (4.1.5.2-3) unstable; urgency=low
 .
   * Switch to source package format 3.0 (quilt). Convert all Git
     feature/bugfix branches into quilt patch series.
   * Remove obsolete dh_desktop call from debian/rules.
   * Add debhelper dependency variables to fsl-doc control stanza.
   * No longer compile with '-Wl,--as-needed' to prevent symbols from
     libcprob to be substituted by external replacements.
   * Updated and extended the package description.
   * Changed maintainer to NeuroDebian. Moved myself into uploaders and
     added Yaroslav Halchenko.
   * Fix syntax error in 'rotate_bvecs' script.
 .
 fsl (4.1.5.2-2) unstable; urgency=low
 .
   * Fix broken fslmaths option (-tfce). Thanks to Clark Johnson and Matthew
     Webster.
   * Bumped Standard version to 3.8.4.0 -- no changes necessary.
   * Remove support for octave2.1 dependency and allow for octave3.2.
     Thanks to Thomas Weber for the report (Closes: #572763).
 .
 fsl (4.1.5.2-1) unstable; urgency=low
 .
   * New upstream service release. Fixes issues with broken FNIRT scripts.
   * Include `fslecho` script in the binary package (Closes: #567133). Thanks to
     Petr Hlustík for reporting.
 .
 fsl (4.1.5-1) unstable; urgency=low
 .
   * New upstream release.
     * An issue with Randomise "pausing" has been fixed.
     * There are some improvements to the bedpostx monitor script.
     * Large speedup for invwarp by automatically adjusting the useful FOV
       internally (no cropping of the original images needed).
     * Non-linear initialisation in bedpostx to allow better convergence of
       the MCMC chains
     * Some improvements and new options in Probtrackx:
       - allows to input nonlinear (FNIRT) warpfield instead of FLIRT
         matrices
       - bug fix in initial fibre selection
       - tracking from freesurfer cortical surface (into the brain)
       - tracking from random locations within a seed voxel
   * No longer compile with '-ansi -pedantic', since a significant part of the
     sources is actually not ANSI compliant (Closes: #546003).
   * Don't use roundl() to round doubles in src/basisfield/splinefield.cpp to
     prevent FTFBS on ARMEL (Closes: #513272).
   * Bumped Standard version to 3.8.3.0 -- no changes necessary.
   * New config variable FSLPARALLEL. If set, FSL will submit jobs to a running
     Sun Gridengine. By default, this setting is disabled in /etc/fsl/fsl.sh.
     (Closes: #546238). Added suggested package 'gridengine-client'.
     See README.Debian for more information.
   * Remove all menu items of GUI-apps that are directly accessible from the
     central FSL GUI. The menu got too crowded with all the different FSL
     items.
Checksums-Sha1: 
 ada995919f78e0c5a0cab6bb93e890a7cb8680cf 1550 fsl_4.1.6-1.dsc
 83b4d2e686f16171047aac4ee14b2cfbcd3c85e2 15087746 fsl_4.1.6.orig.tar.gz
 5c34320c7969321684110383ed5097c4043fc14f 29016 fsl_4.1.6-1.debian.tar.gz
Checksums-Sha256: 
 253f21cc368eb3414c63d1d78224bbcb12cebfba23047c2c45073e118ec96ae1 1550 fsl_4.1.6-1.dsc
 cabbd51f13249dbbd54fe962dcd085030d9c45a2b66d37867a552e48c365745d 15087746 fsl_4.1.6.orig.tar.gz
 61a6d22289dbe0fe562e96cc20ab90896e7f7110fb81c201a051daee7b410334 29016 fsl_4.1.6-1.debian.tar.gz
Files: 
 d361082a6a0274fb07ad14cd9cef10a1 1550 non-free/science optional fsl_4.1.6-1.dsc
 8531b2be0315e3b9bd796d0317664165 15087746 non-free/science optional fsl_4.1.6.orig.tar.gz
 fc8ac145bd033e1646c4041874421bd0 29016 non-free/science optional fsl_4.1.6-1.debian.tar.gz
Origin: debian/unstable
Launchpad-Bugs-Fixed: 602846

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