[ubuntu/jaunty] last-align 37-1 (Accepted)

[Ubuntu Installer]

last-align (37-1) unstable; urgency=low

  * New upstream release. 
    - Updated the documentation, including a table of optimal spaced seeds.
    - Made lastdb bucket-making code slightly simpler & faster.
    - Enabled reading & writing of huge files (at least on one system with
      Linux-2.6.13/x86_64/gcc-4.0.2).
    - Made lastdb radix sort a bit faster, with the oracle array trick.
    - Allowed the mismatch score to be zero, due to a request.
    - Made gapped extension faster for short sequences (e.g. tag mapping).
    - Bugfix: the sequence names weren't printed correctly for
      match-counting output (-j 0).
    - Fixed compiler warnings with gcc 4.3.

Date: Mon,  12 Jan 2009 11:43:53 +0000
Changed-By: Bhavani Shankar <right2bhavi at gmail.com>
Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Origin: Debian/unstable
https://launchpad.net/ubuntu/jaunty/+source/last-align/37-1
-------------- next part --------------
Origin: Debian/unstable
Format: 1.7
Date: Mon,  12 Jan 2009 11:43:53 +0000
Source: last-align
Binary: last-align
Architecture: source
Version: 37-1
Distribution: jaunty
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Bhavani Shankar <right2bhavi at gmail.com>
Description: 
 last-align - genome-scale comparison of biological sequences
Changes: 
 last-align (37-1) unstable; urgency=low
 .
   * New upstream release. 
     - Updated the documentation, including a table of optimal spaced seeds.
     - Made lastdb bucket-making code slightly simpler & faster.
     - Enabled reading & writing of huge files (at least on one system with
       Linux-2.6.13/x86_64/gcc-4.0.2).
     - Made lastdb radix sort a bit faster, with the oracle array trick.
     - Allowed the mismatch score to be zero, due to a request.
     - Made gapped extension faster for short sequences (e.g. tag mapping).
     - Bugfix: the sequence names weren't printed correctly for
       match-counting output (-j 0).
     - Fixed compiler warnings with gcc 4.3.
Files: 
 08cdcabe65601f2aeba0ab4f656a0cb4 1259 science optional last-align_37-1.dsc
 0d13e9e6862782ce8979c58396bc69ec 3090 science optional last-align_37-1.diff.gz
 a7d62d2e01bae9f50497db70fb27c909 94899 science optional last-align_37.orig.tar.gz